Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs12633821 | chr3:99943166 | C/A | 3.3E-8 | 211 | 16.47 | 19.6 | 4.37 | KM Plot |
| KIRP | rs12638207 | chr3:190109889 | T/C | 9.91E-5 | 213 | 13.77 | 19.92 | 12.1 | KM Plot |
| KIRP | rs12642410 | chr4:1308409 | A/G | 0.000546 | 213 | 14.97 | 19.28 | 11.2 | KM Plot |
| KIRP | rs12668511 | chr7:135253229 | G/A | 1.12E-6 | 206 | 14.68 | 17.13 | 9.77 | KM Plot |
| KIRP | rs12685074 | chr9:112115687 | C/T | 0 | 205 | 16.53 | 16.47 | 0.97 | KM Plot |
| KIRP | rs12695047 | chr3:194672555 | T/G | 6.52E-5 | 209 | 18.03 | 13.77 | 8.38 | KM Plot |
| KIRP | rs12716757 | chr16:74471786 | G/A | 0.000553 | 213 | 14.32 | 19.87 | 13.1 | KM Plot |
| KIRP | rs12725573 | chr1:89894590 | A/C | 3.61E-5 | 210 | 8.28 | 13.97 | 16.53 | KM Plot |
| KIRP | rs12734371 | chr1:63807348 | C/T | 7.51E-6 | 214 | 14.47 | 18 | 8.03 | KM Plot |
| KIRP | rs12740048 | chr1:95257719 | A/G | 0.000245 | 210 | 13.17 | 14.83 | 16.5 | KM Plot |
| KIRP | rs12743595 | chr1:63812468 | T/A | 4.01E-6 | 209 | 14.87 | 18 | 8.03 | KM Plot |
| KIRP | rs12744336 | chr1:89894760 | C/T | 0.000128 | 212 | 8.28 | 13.97 | 16.53 | KM Plot |
| KIRP | rs12748956 | chr1:212698444 | A/G | 4.43E-7 | 214 | 15.2 | 22.15 | 10.63 | KM Plot |
| KIRP | rs12752623 | chr1:27628545 | A/G | 5.48E-7 | 214 | 9.77 | 27.32 | 14.53 | KM Plot |
| KIRP | rs12758540 | chr1:95257669 | C/T | 0.000237 | 210 | 13.17 | 14.83 | 17.27 | KM Plot |